sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3I56-924-91
X
>3CD6-924-91
X
>3CCJ-924-91
X
>3CCU-924-91
X
>1YJN-924-91
X
>1YJ9-924-91
X
>1YIT-924-91
X
>1YIJ-924-91
X
</seq>
<hsp>
0 1:0.718427531201
0 2:0.798125863894
0 3:0.671499015611
0 4:0.303335968605
0 5:0.373339095347
0 6:0.299898780995
0 7:0.334481173992
1 2:0.223222056939
1 3:0.290151640111
1 4:0.659180029429
1 5:0.950688352933
1 6:0.62220104926
1 7:0.579904706078
2 3:0.438403291556
2 4:0.768003912541
2 5:1.0
2 6:0.66949375998
2 7:0.624232919576
3 4:0.554086207384
3 5:0.85173035611
3 6:0.54487597763
3 7:0.481319867713
4 5:0.448117784992
4 6:0.310614964521
4 7:0.313082926467
5 6:0.339101506867
5 7:0.403996059575
6 7:0.124944563533
</hsp>