ClaRNA

Doublet Group info: classifier/stacking/<</AA/sub-003

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: <</AA/sub-003
Members:
count: 34
download members
3OH5:A486:A485
3U5F:6397:6395
3OI0:A442:A441
2ZJR:X1237:X1236
3U5B:2738:2737
1Q81:A1159:A1158
3NMU:D20:D19
1K9M:A1159:A1158
3OHJ:A444:A443
2QA4:0794:0793
2QUS:A52:A51
3CCV:01615:01614
3OI1:A492:A491
3KNK:B25:B24
1N32:A674:A673
2OTJ:01615:01614
1YJW:0120:0119
3G78:A185:A184
2ZJR:X167:X166
3CCQ:0465:0464
1YIT:01159:01158
3CCU:01159:01158
1YJ9:02271:02270
2OEU:A38:A37
1M90:A396:A395
1JJ2:0424:0423
3OH5:A515:A514
3F1G:A654:A653
3KNH:A1137:A1136
1YI2:0424:0423
3G8T:G10:G9
1M90:A2271:A2270
3G6E:01159:01158
1M5K:E9:E8
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/<> 6 0.081
stacking/>> 47 0.120
stacking/<< 48 0.122
base-ribose/H_0BR 8 0.124
base-phosphate/W_5BPh 2 0.159
base-phosphate/H_7BPh 1 0.282
base-phosphate/SW_2BPh 1 0.327
base-ribose/SW_2BR 1 0.493
base-ribose/H_7BR 1 0.515
base-ribose/W_4BR 1 0.568

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol