sequences=25
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OI1-A1606-A1605
X
>2VQE-Y4-Y3
X
>3R8T-A1488-A1487
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>3U5D-12036-12035
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X
>1ASZ-R23-R22
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>1N32-A1309-A1308
X
>1YZD-C9-C8
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>3SKI-B44-B43
X
>2QA4-0133-0132
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>3OVA-C3-C2
X
>3OH7-A2420-A2419
X
>2PXU-B31-B30
X
>3CCE-0784-0783
X
>3F1H-A2435-A2434
X
>1VQ5-0784-0783
X
>3U5D-12649-12648
X
</seq>
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