sequences=20
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CD6-01556-01555
X
>1VQ9-9103-9102
X
>3OHK-B57-B56
X
>3CCJ-02542-02541
X
>3CMA-01556-01555
X
>3OXD-A21-A20
X
>1S72-01556-01555
X
>3OHZ-A237-A236
X
>1YI2-02327-02326
X
>2QEX-01556-01555
X
>1FJG-A880-A879
X
>1M90-A1539-A1538
X
>1GID-A37-A36
X
>3CCR-01565-01564
X
>1VQ4-02542-02541
X
>1NJI-A1539-A1538
X
>1VQ4-01539-01538
X
>1YHQ-01539-01538
X
>3CC7-01565-01564
X
>3CC4-01565-01564
X
</seq>
<hsp>
0 1:0.408068546958
0 2:0.576333303464
0 3:0.871436903324
0 4:0.284662989391
0 5:0.254810564127
0 6:0.218210605346
0 7:0.36924068576
0 8:0.874734278937
0 9:0.100000717598
0 10:0.460307569387
0 11:0.460691484157
0 12:0.871293487385
0 13:0.471386648723
0 14:0.560445414266
0 15:0.418987240978
0 16:0.444748970528
0 17:0.564802522614
0 18:0.697894307127
0 19:0.624681809174
1 2:0.743721991076
1 3:0.758709152109
1 4:0.48611372713
1 5:0.250283951724
1 6:0.464494887194
1 7:0.279830901205
1 8:0.97018296949
1 9:0.377085369381
1 10:0.442081793881
1 11:0.573648465943
1 12:1.0
1 13:0.600322165267
1 14:0.559787762657
1 15:0.566410421626
1 16:0.573685327077
1 17:0.725450002963
1 18:0.835626966306
1 19:0.774108858526
2 3:0.80988889837
2 4:0.762148302441
2 5:0.540417673407
2 6:0.702813808534
2 7:0.759072677209
2 8:0.692714224186
2 9:0.590416480752
2 10:0.697382875451
2 11:0.591228914086
2 12:0.883430763837
2 13:0.439155296454
2 14:0.586706184445
2 15:0.499547825599
2 16:0.496950726369
2 17:0.723754932314
2 18:0.641194518795
2 19:0.651333937942
3 4:0.985011096758
3 5:0.700793005453
3 6:0.972589526092
3 7:0.719774435827
3 8:0.547316032856
3 9:0.85717660528
3 10:0.543151244508
3 11:0.512782196985
3 12:0.614683229038
3 13:0.508693770816
3 14:0.351283912808
3 15:0.544956695468
3 16:0.520035042115
3 17:0.640134525076
3 18:0.508689359745
3 19:0.536268078186
4 5:0.453167369906
4 6:0.0930696064431
4 7:0.351211179293
4 8:0.982682201073
4 9:0.218867776679
4 10:0.523266166077
4 11:0.588994610091
4 12:0.926784607946
4 13:0.639073813426
4 14:0.694503955677
4 15:0.559337145385
4 16:0.58363249445
4 17:0.583614648177
4 18:0.811288529378
4 19:0.708992163295
5 6:0.403952565902
5 7:0.332823098169
5 8:0.827711312547
5 9:0.259713764044
5 10:0.386316390452
5 11:0.420340568391
5 12:0.865065638631
5 13:0.410619044067
5 14:0.433318484648
5 15:0.386703829145
5 16:0.398204395007
5 17:0.601326506242
5 18:0.662632689297
5 19:0.614783889548
6 7:0.362882931269
6 8:0.968153744149
6 9:0.168400330049
6 10:0.532052845155
6 11:0.57172501326
6 12:0.935206491494
6 13:0.601335360508
6 14:0.668133291294
6 15:0.534729650663
6 16:0.560277889329
6 17:0.595787560613
6 18:0.793455896476
6 19:0.701055646944
7 8:0.834686885792
7 9:0.314142078918
7 10:0.283529308953
7 11:0.4317345018
7 12:0.81698782936
7 13:0.516682551623
7 14:0.485344045262
7 15:0.443182627527
7 16:0.454475683973
7 17:0.511929415406
7 18:0.714717328268
7 19:0.613653490065
8 9:0.871442313677
8 10:0.624690368424
8 11:0.489443150903
8 12:0.43406446896
8 13:0.463117227696
8 14:0.5049266341
8 15:0.493817876735
8 16:0.472335743865
8 17:0.51992318808
8 18:0.440113226009
8 19:0.421617434376
9 10:0.424916110011
9 11:0.463671527066
9 12:0.861597094623
9 13:0.484306023492
9 14:0.557972589111
9 15:0.420336641343
9 16:0.443608562617
9 17:0.542886597738
9 18:0.701235633774
9 19:0.619185427635
10 11:0.262662947178
10 12:0.599669412036
10 13:0.388349020023
10 14:0.354117496101
10 15:0.297021518177
10 16:0.295340850276
10 17:0.367841740298
10 18:0.537401381989
10 19:0.434379816922
11 12:0.469258916298
11 13:0.187806534342
11 14:0.2288116159
11 15:0.101378874733
11 16:0.103661825945
11 17:0.264008998243
11 18:0.337073433087
11 19:0.246248597092
12 13:0.542716652852
12 14:0.548593530884
12 15:0.503826978042
12 16:0.495331011436
12 17:0.354540877583
12 18:0.323086017616
12 19:0.281767325959
13 14:0.202305998916
13 15:0.132130157493
13 16:0.127909042585
13 17:0.374716406379
13 18:0.313588569409
13 19:0.288641750765
14 15:0.242695783664
14 16:0.229466309903
14 17:0.411196823135
14 18:0.344873000154
14 19:0.329538585034
15 16:0.0348816936329
15 17:0.283908705673
15 18:0.32925243654
15 19:0.25216814261
16 17:0.293124573044
16 18:0.322278429807
16 19:0.24943789214
17 18:0.349431490098
17 19:0.202791978425
18 19:0.153475301924
</hsp>