sequences=19
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3L3C-S86-S85
X
>2J01-A119-A118
X
>1FFK-0539-0538
X
>1YIT-0540-0539
X
>1VQP-0540-0539
X
>1VQ7-01041-01040
X
>3CCL-01041-01040
X
>3CCV-01038-01037
X
>1YJW-01041-01040
X
>3CXC-02441-02440
X
>3CMA-0540-0539
X
>2J01-A1011-A1010
X
>1MSY-A15-A14
X
>3F1F-A1003-A1002
X
>3CCR-0806-0805
X
>1VQK-02441-02440
X
>1N8R-A1590-A1589
X
>1VQ8-0806-0805
X
>1M90-A806-A805
X
</seq>
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