sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1VQ8-01152-01150
X
>1Q86-A1152-A1150
X
>3CC7-01152-01150
X
>3G6E-01152-01150
X
>1YIJ-01152-01150
X
>1VQP-0681-0680
X
>1VQL-0681-0680
X
>3OHC-A422-A421
X
>1VQ6-0681-0680
X
>2OTJ-0681-0680
X
>3OI0-A422-A421
X
>2UUB-A150-A149
X
</seq>
<hsp>
0 1:0.36984187975
0 2:0.462059229497
0 3:0.349364987668
0 4:0.312731242189
0 5:0.811242441369
0 6:0.79668072563
0 7:0.801054664907
0 8:0.817879676479
0 9:0.754669081967
0 10:0.66612293042
0 11:0.937511542289
1 2:0.181083541195
1 3:0.108862775691
1 4:0.119591582905
1 5:0.936438421956
1 6:0.935983239872
1 7:0.866664698312
1 8:0.988326947586
1 9:0.940925929408
1 10:0.759450353456
1 11:1.0
2 3:0.166631322887
2 4:0.186227377151
2 5:0.927813225176
2 6:0.937489540474
2 7:0.819295991344
2 8:0.996129913356
2 9:0.943976431465
2 10:0.716854141937
2 11:0.945963205684
3 4:0.0795168995619
3 5:0.847462227373
3 6:0.849396001372
3 7:0.76433741665
3 8:0.904197344543
3 9:0.856512580534
3 10:0.666393249857
3 11:0.913255072966
4 5:0.863089195442
4 6:0.862334570823
4 7:0.772242468645
4 8:0.909270315952
4 9:0.852944090437
4 10:0.65852045691
4 11:0.900762636905
5 6:0.0688260930811
5 7:0.401194299826
5 8:0.163256820516
5 9:0.218701079609
5 10:0.42160661025
5 11:0.570686462605
6 7:0.433556316791
6 8:0.111640922606
6 9:0.186940711139
6 10:0.422958836966
6 11:0.572790496304
7 8:0.471653613542
7 9:0.42503082419
7 10:0.308454909177
7 11:0.42129128341
8 9:0.124796555664
8 10:0.437133625854
8 11:0.562694299094
9 10:0.363892633864
9 11:0.504473497637
10 11:0.303550329178
</hsp>