sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2QA4-01191-01190
X
>3G6E-01192-01191
X
>1S72-01192-01191
X
>3CCE-01192-01191
X
>1YI2-01192-01191
X
>1YJN-01192-01191
X
>2J03-A1816-A1886
X
>2J01-A1816-A1886
X
</seq>
<hsp>
0 1:0.326228363047
0 2:0.24721852755
0 3:0.349238311276
0 4:0.279489794403
0 5:0.332721596238
0 6:0.971664476119
0 7:1.0
1 2:0.119150883143
1 3:0.0969980183852
1 4:0.198175070687
1 5:0.240786112169
1 6:0.874975157676
1 7:0.887689787691
2 3:0.131583620224
2 4:0.138643913336
2 5:0.200572711945
2 6:0.862067106732
2 7:0.877364986417
3 4:0.165657954136
3 5:0.192445845423
3 6:0.88956164637
3 7:0.898263119401
4 5:0.20983394813
4 6:0.857898571045
4 7:0.873895545065
5 6:0.90501008991
5 7:0.914775011866
6 7:0.0864657150082
</hsp>