sequences=15
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1VQN-0952-0951
X
>3CCJ-01885-01884
X
>2OTJ-0952-0951
X
>1FFK-0951-0950
X
>3CCL-0952-0951
X
>1YJW-0952-0951
X
>1NTA-A13-A12
X
>3U5D-11623-11622
X
>3U5B-2955-2954
X
>3OHZ-A1750-A1749
X
>1VQ8-02101-02100
X
>3OH7-A1750-A1749
X
>1FFK-0815-0814
X
>1VQ7-042-041
X
>1XMQ-A1077-A1076
X
</seq>
<hsp>
0 1:0.871649161349
0 2:0.307739550936
0 3:0.2424569812
0 4:0.405999948256
0 5:0.611808297811
0 6:0.583970301947
0 7:0.623289357669
0 8:0.697635118828
0 9:0.726605109058
0 10:0.761954892361
0 11:0.766460156719
0 12:0.717820260004
0 13:0.902703082148
0 14:0.870201547259
1 2:0.834195074034
1 3:0.751590598567
1 4:0.664221910368
1 5:0.668061473137
1 6:0.995032008975
1 7:0.634633348967
1 8:0.999999207108
1 9:0.858245985975
1 10:0.838511599605
1 11:0.966641160646
1 12:0.798327453774
1 13:0.726594264092
1 14:0.738644575375
2 3:0.222322407943
2 4:0.224004564644
2 5:0.461154566538
2 6:0.577681796723
2 7:0.54902339374
2 8:0.776296209773
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2 10:0.776192723729
2 11:0.760513905225
2 12:0.723744445522
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2 14:0.784308625476
3 4:0.250260630048
3 5:0.427721168274
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3 7:0.508617030578
3 8:0.69679990676
3 9:0.672360747396
3 10:0.695764943073
3 11:0.720088197232
3 12:0.624559471282
3 13:0.859352449414
3 14:0.786505292221
4 5:0.304175617733
4 6:0.545099217251
4 7:0.397477053339
4 8:0.701728042605
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4 10:0.644638018936
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4 12:0.582536825434
4 13:0.753003180108
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5 10:0.490782482273
5 11:0.537164809032
5 12:0.45264010591
5 13:0.7284741203
5 14:0.541015170582
6 7:0.59985735465
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6 10:0.36928770387
6 11:0.395538961254
6 12:0.456493900269
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7 14:0.379994866472
8 9:0.252731405394
8 10:0.58051762768
8 11:0.40744428116
8 12:0.420708700033
8 13:0.556938845759
8 14:0.622207441971
9 10:0.609003968969
9 11:0.496572655832
9 12:0.40624292425
9 13:0.519677927121
9 14:0.615942075156
10 11:0.302884843505
10 12:0.249121749507
10 13:0.575790220175
10 14:0.51668719541
11 12:0.268358217678
11 13:0.559182081661
11 14:0.456745482162
12 13:0.486086545859
12 14:0.456411054568
13 14:0.342001044383
</hsp>