sequences=14
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5D-1634-1632
X
>1VQ4-01669-01667
X
>1FFK-01622-01620
X
>3CCQ-01669-01667
X
>2J02-A662-A661
X
>1FG0-A400-A399
X
>3R8N-A692-A691
X
>3OH5-A505-A504
X
>1K8A-A2151-A2150
X
>3CCL-02151-02150
X
>3CPW-0916-0915
X
>1VQP-02331-02330
X
>2H0Z-A9-A8
X
>2GCS-A9-A8
X
</seq>
<hsp>
0 1:0.197338359118
0 2:0.178768920204
0 3:0.300300614749
0 4:0.964237331275
0 5:0.967108338367
0 6:0.537701290717
0 7:0.669139629125
0 8:0.930237638102
0 9:0.865079266301
0 10:0.645320830453
0 11:0.586854574569
0 12:0.685680574903
0 13:0.720480216483
1 2:0.0664187888897
1 3:0.283188819776
1 4:0.999996823208
1 5:0.951479374038
1 6:0.565246694952
1 7:0.68306435823
1 8:0.931481130711
1 9:0.869001181619
1 10:0.647144723004
1 11:0.583272402595
1 12:0.659742158403
1 13:0.694678923553
2 3:0.251966982236
2 4:0.993697959964
2 5:0.962347242253
2 6:0.538455851263
2 7:0.663647510636
2 8:0.93505325437
2 9:0.869469057126
2 10:0.642970416793
2 11:0.578931865133
2 12:0.673149846361
2 13:0.707448850945
3 4:0.957662747462
3 5:0.943475491401
3 6:0.512732672639
3 7:0.651288988803
3 8:0.878290724147
3 9:0.803970654099
3 10:0.505766891227
3 11:0.452458783416
3 12:0.635308521797
3 13:0.646738012325
4 5:0.321170273721
4 6:0.54017078565
4 7:0.444986665935
4 8:0.253938707609
4 9:0.263754979225
4 10:0.585390106459
4 11:0.600630785047
4 12:0.511453261756
4 13:0.536887349051
5 6:0.608942139314
5 7:0.534886606927
5 8:0.208454134241
5 9:0.24483238403
5 10:0.549978332953
5 11:0.555086286843
5 12:0.359306736166
5 13:0.384517400773
6 7:0.297261018164
6 8:0.546388130024
6 9:0.482525410639
6 10:0.431375609989
6 11:0.402891615885
6 12:0.477692774179
6 13:0.52134353759
7 8:0.486157542406
7 9:0.421745870712
7 10:0.506216938677
7 11:0.451685455299
7 12:0.450997860697
7 13:0.486190548703
8 9:0.120702124802
8 10:0.454204179974
8 11:0.481890839678
8 12:0.374686388183
8 13:0.384537352704
9 10:0.379337451384
9 11:0.40513482696
9 12:0.327080108283
9 13:0.336702024943
10 11:0.131979221436
10 12:0.313775936186
10 13:0.301583838361
11 12:0.264335437952
11 13:0.250367145623
12 13:0.0815808311244
</hsp>