sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1XOK-B5-B7
X
>3F1G-A537-A536
X
>3CCV-01113-02625
X
>3CME-01113-02625
X
>3KNH-A528-A527
X
>1VQO-01113-02625
X
>1YJW-01113-02625
X
>1VQ8-01113-02625
X
>1YHQ-01113-02625
X
</seq>
<hsp>
0 1:0.832515180307
0 2:0.927990661868
0 3:0.999670819445
0 4:0.885052364942
0 5:0.919750712002
0 6:0.887087122462
0 7:0.946214602194
0 8:1.0
1 2:0.680389737471
1 3:0.636111898173
1 4:0.851087735452
1 5:0.593572367848
1 6:0.516157806678
1 7:0.541938498847
1 8:0.577669854459
2 3:0.333517862879
2 4:0.407359525049
2 5:0.263549266458
2 6:0.314334746989
2 7:0.291168423186
2 8:0.306236541586
3 4:0.599339838568
3 5:0.373922340166
3 6:0.311197491293
3 7:0.308869350524
3 8:0.258079554774
4 5:0.328170623644
4 6:0.433724345072
4 7:0.441520474073
4 8:0.471210987746
5 6:0.167402819561
5 7:0.147112967322
5 8:0.177192232655
6 7:0.0954443049066
6 8:0.168617315
7 8:0.109423205884
</hsp>