sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1K9M-A1970-A1969
X
>2OTL-01970-01969
X
>1YI2-02081-02080
X
>2J00-A129-A128
X
>1NJI-A1970-A1969
X
>2J02-A653-A652
X
>1FFK-0549-0548
X
</seq>
<hsp>
0 1:0.150293446266
0 2:0.351876039171
0 3:0.521118740341
0 4:0.188902186077
0 5:0.923921898517
0 6:0.680407671591
1 2:0.344340193983
1 3:0.554227182128
1 4:0.123642188458
1 5:1.0
1 6:0.698153534788
2 3:0.362911015186
2 4:0.248766785461
2 5:0.763881784229
2 6:0.452703344193
3 4:0.469955813338
3 5:0.634001245456
3 6:0.413971766834
4 5:0.924637023395
4 6:0.59537791094
5 6:0.500967905525
</hsp>