sequences=17
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8S-A950-A952
X
>2ZZM-B11-B12
X
>1Q81-A1711-A1712
X
>3U5H-51857-51858
X
>3CCS-01711-01712
X
>3CCM-01711-01712
X
>1Q86-A1711-A1712
X
>1NJI-A1711-A1712
X
>3CCR-01711-01712
X
>1YIT-01711-01712
X
>3CME-01711-01712
X
>3CD6-01711-01712
X
>1FFK-01664-01665
X
>1VQ6-01711-01712
X
>3CC2-01711-01712
X
>1JJ2-01711-01712
X
>1VQ9-01711-01712
X
</seq>
<hsp>
0 1:0.58430571233
0 2:0.935782508658
0 3:0.935401310447
0 4:0.809162747111
0 5:0.915781084484
0 6:0.892585864101
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0 15:0.887277858676
0 16:0.999988955014
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14 15:0.107193433284
14 16:0.254268135235
15 16:0.253941423955
</hsp>