sequences=16
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5D-12786-12787
X
>1QU3-T72-T73
X
>1N8R-A1975-A1976
X
>3R8S-A2146-A2147
X
>1K8A-A1480-A1481
X
>1JJ2-01480-01481
X
>1Q82-A1112-A1113
X
>1F7V-B55-B56
X
>1VQ7-01480-01481
X
>1Y6S-A19-A20
X
>1S72-01480-01481
X
>3KNK-A1431-A1432
X
>3CCL-01480-01481
X
>1YIJ-01480-01481
X
>3G71-01480-01481
X
>1YJ9-01480-01481
X
</seq>
<hsp>
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0 2:0.701028764752
0 3:0.811049731473
0 4:0.515785601115
0 5:0.51823766228
0 6:0.746491823721
0 7:0.535208867687
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0 10:0.505768910991
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0 15:0.632507077629
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1 4:0.507005066241
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1 9:1.0
1 10:0.51669254285
1 11:0.861217999928
1 12:0.648183836397
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1 14:0.578014132215
1 15:0.604380444932
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12 13:0.143161829128
12 14:0.152122014286
12 15:0.220475566179
13 14:0.115980367846
13 15:0.142817574097
14 15:0.0985228197346
</hsp>