sequences=15
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2QEX-02343-02344
X
>3U5D-12169-12170
X
>3CCS-02343-02344
X
>1YI2-02343-02344
X
>1KD1-A2343-A2344
X
>1VQ9-02343-02344
X
>3CCR-02343-02344
X
>1VQN-02343-02344
X
>3I56-02343-02344
X
>1VQ5-02343-02344
X
>3G71-02343-02344
X
>3CD6-02343-02344
X
>3CCV-02343-02344
X
>3CMA-02343-02344
X
>3CME-02343-02344
X
</seq>
<hsp>
0 1:0.93927740089
0 2:0.220868099149
0 3:0.270495313258
0 4:0.275852964331
0 5:0.218840144072
0 6:0.278820736632
0 7:0.27899967013
0 8:0.315292774869
0 9:0.490535017939
0 10:0.319878823502
0 11:0.286480943522
0 12:0.382152195423
0 13:0.389429765007
0 14:0.379732022824
1 2:0.9115546406
1 3:0.788605401964
1 4:0.85231449789
1 5:1.0
1 6:0.957343886001
1 7:0.870603397047
1 8:0.757898793144
1 9:0.618893917054
1 10:0.746871621656
1 11:0.777974067134
1 12:0.685119542903
1 13:0.839484528299
1 14:0.763253847572
2 3:0.293988972066
2 4:0.294025940673
2 5:0.290612204253
2 6:0.244607448928
2 7:0.27159500831
2 8:0.242546068376
2 9:0.402791162454
2 10:0.25503568975
2 11:0.181844816627
2 12:0.318463272564
2 13:0.263416160346
2 14:0.254540052583
3 4:0.121607630088
3 5:0.252710691606
3 6:0.235388198289
3 7:0.126383103235
3 8:0.257834636133
3 9:0.289311690819
3 10:0.208952575064
3 11:0.215831712357
3 12:0.165022492085
3 13:0.244918160581
3 14:0.230055420902
4 5:0.202881888147
4 6:0.204914452146
4 7:0.116016598174
4 8:0.287189576022
4 9:0.351579855969
4 10:0.271502856926
4 11:0.250205282085
4 12:0.218431771814
4 13:0.242512899654
4 14:0.266014070222
5 6:0.263838255186
5 7:0.189195317728
5 8:0.32940430394
5 9:0.504703834731
5 10:0.377946868427
5 11:0.322042914302
5 12:0.376791323416
5 13:0.348298352614
5 14:0.385121289297
6 7:0.213453767684
6 8:0.379856514567
6 9:0.415204888847
6 10:0.297834405742
6 11:0.293070530042
6 12:0.306000847676
6 13:0.237652536297
6 14:0.27027747438
7 8:0.249960770236
7 9:0.33445089317
7 10:0.243681976632
7 11:0.21041497587
7 12:0.221766493237
7 13:0.195702330359
7 14:0.230975519764
8 9:0.295553027426
8 10:0.215302778927
8 11:0.119621975096
8 12:0.243367962649
8 13:0.275497812196
8 14:0.247607526831
9 10:0.204262116819
9 11:0.248961179138
9 12:0.163480943614
9 13:0.261633592732
9 14:0.197561479394
10 11:0.123490560912
10 12:0.199419043518
10 13:0.232129503714
10 14:0.184272091548
11 12:0.199935649996
11 13:0.195814790731
11 14:0.163020744164
12 13:0.197632123495
12 14:0.14201272721
13 14:0.104489121735
</hsp>