sequences=14
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3IQR-A43-A44
X
>3CCR-02643-02644
X
>1YIT-0242-0243
X
>1VQP-0242-0243
X
>3CME-0242-0243
X
>1N8R-A242-A243
X
>1VQN-0242-0243
X
>1VQM-0242-0243
X
>1M90-A242-A243
X
>1JJ2-0242-0243
X
>3CC4-0242-0243
X
>1VQ6-0242-0243
X
>3CCV-0242-0243
X
>3CCQ-0242-0243
X
</seq>
<hsp>
0 1:0.488264506016
0 2:0.734658854259
0 3:0.758582629599
0 4:0.733427903645
0 5:0.980512513453
0 6:0.678911960323
0 7:0.764354817991
0 8:1.0
0 9:0.973714764175
0 10:0.801711866787
0 11:0.812831096452
0 12:0.735499966609
0 13:0.861622757564
1 2:0.612037339357
1 3:0.568517174673
1 4:0.507116311022
1 5:0.800803192587
1 6:0.517428198901
1 7:0.654924722838
1 8:0.825464559288
1 9:0.806672878398
1 10:0.69540324637
1 11:0.674879621205
1 12:0.615787645693
1 13:0.699200199686
2 3:0.177064656452
2 4:0.439860672868
2 5:0.320101281603
2 6:0.255356013655
2 7:0.222271882575
2 8:0.344698588216
2 9:0.330113478172
2 10:0.399479073732
2 11:0.282631135108
2 12:0.356124708517
2 13:0.388107932926
3 4:0.431574555358
3 5:0.294962892573
3 6:0.170652584439
3 7:0.167011442202
3 8:0.3006661107
3 9:0.296431946266
3 10:0.33860596486
3 11:0.249349049586
3 12:0.286572885824
3 13:0.301049981479
4 5:0.616657691482
4 6:0.353877673886
4 7:0.483824614655
4 8:0.61872136512
4 9:0.606616135813
4 10:0.579496315593
4 11:0.484824929706
4 12:0.467129283989
4 13:0.483229738461
5 6:0.389827046415
5 7:0.289373398235
5 8:0.0990888609755
5 9:0.0936329262483
5 10:0.358277043489
5 11:0.24405596253
5 12:0.381594946877
5 13:0.325542066773
6 7:0.165355089763
6 8:0.390117395513
6 9:0.37749378585
6 10:0.332030970984
6 11:0.246005651044
6 12:0.221327311186
6 13:0.25927779666
7 8:0.28018490679
7 9:0.269626864535
7 10:0.283165666546
7 11:0.185670857017
7 12:0.224413134063
7 13:0.237301958213
8 9:0.0465831799442
8 10:0.324655584739
8 11:0.229098202481
8 12:0.355628350277
8 13:0.284593981481
9 10:0.29641701462
9 11:0.196614628999
9 12:0.330603793472
9 13:0.268464083897
10 11:0.184986189813
10 12:0.138543239696
10 13:0.195740758163
11 12:0.164111207496
11 13:0.158931032519
12 13:0.139820653741
</hsp>