sequences=14
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8O-A490-A491
X
>2QA4-0428-0429
X
>1NYI-B18-B19
X
>3D0U-A159-A160
X
>3R8S-A413-A414
X
>2CT8-D34-D35
X
>2CT8-C34-C35
X
>3CUN-D28-D29
X
>3CCR-01517-01518
X
>2QEX-01517-01518
X
>3F1F-A2436-A2437
X
>1VQM-01768-01769
X
>3OHJ-A1679-A1680
X
>2J01-A1679-A1680
X
</seq>
<hsp>
0 1:0.65621120351
0 2:0.756680207466
0 3:0.499215987285
0 4:0.596065857914
0 5:0.289995882901
0 6:0.506311059072
0 7:0.781387258453
0 8:0.481399050298
0 9:0.436978185313
0 10:0.507172811576
0 11:0.754105522467
0 12:0.792638850333
0 13:0.773645835454
1 2:1.0
1 3:0.391510947737
1 4:0.676924011228
1 5:0.495596562721
1 6:0.473806216629
1 7:0.819354254835
1 8:0.759600836296
1 9:0.481368241806
1 10:0.589105691228
1 11:0.803677444673
1 12:0.752193416123
1 13:0.746601504601
2 3:0.803961580759
2 4:0.362258352036
2 5:0.709586763373
2 6:0.654707474446
2 7:0.552282996572
2 8:0.440042835299
2 9:0.758869036207
2 10:0.615351327941
2 11:0.435726884687
2 12:0.647486236415
2 13:0.57924360443
3 4:0.530618439693
3 5:0.243792533165
3 6:0.223172666313
3 7:0.645345740957
3 8:0.491843379326
3 9:0.155286323203
3 10:0.369703355872
3 11:0.551517703659
3 12:0.493207835373
3 13:0.497853066419
4 5:0.483459656676
4 6:0.384251477772
4 7:0.522129356897
4 8:0.340839230435
4 9:0.513405550548
4 10:0.436302509552
4 11:0.329541872058
4 12:0.520891702959
4 13:0.460623133073
5 6:0.243197971522
5 7:0.646141295108
5 8:0.370563231807
5 9:0.212758022187
5 10:0.335377678809
5 11:0.573588522741
5 12:0.57582503068
5 13:0.565090250694
6 7:0.570842727766
6 8:0.351599921595
6 9:0.262625425598
6 10:0.300476069938
6 11:0.436191018829
6 12:0.451460238691
6 13:0.436502394537
7 8:0.505035607077
7 9:0.613074429285
7 10:0.358096885006
7 11:0.506452533256
7 12:0.383046767303
7 13:0.323566670465
8 9:0.42101507884
8 10:0.318367229287
8 11:0.3891582563
8 12:0.481694941332
8 13:0.43828452364
9 10:0.340688831112
9 11:0.51572692857
9 12:0.453386256257
9 13:0.466090810578
10 11:0.498228646366
10 12:0.41275032129
10 13:0.374701451004
11 12:0.320179286166
11 13:0.285970178761
12 13:0.111657243803
</hsp>