sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2QEX-0907-02308
X
>1YIT-0907-02308
X
>1YI2-0907-02308
X
>3CC2-0907-02308
X
>3G71-0907-02308
X
>1FFK-0906-02261
X
>3CMA-0907-02308
X
>1VQ9-0907-02308
X
>1VQM-0907-02308
X
>3CME-0907-02308
X
>1VQ8-0907-02308
X
</seq>
<hsp>
0 1:0.999991023701
0 2:0.614736160866
0 3:0.738053302492
0 4:0.578330645351
0 5:0.692254898421
0 6:0.725305327181
0 7:0.640114606895
0 8:0.719776801436
0 9:0.966444514921
0 10:0.663060778536
1 2:0.492594142514
1 3:0.407543685737
1 4:0.537410832087
1 5:0.63853315898
1 6:0.646498654602
1 7:0.558676655942
1 8:0.600251772485
1 9:0.99018693193
1 10:0.65687811332
2 3:0.238828665449
2 4:0.296374514026
2 5:0.550535701185
2 6:0.650955309976
2 7:0.459261273496
2 8:0.638797740107
2 9:0.927508179352
2 10:0.556957898009
3 4:0.348483852103
3 5:0.528605754863
3 6:0.630223642147
3 7:0.428852722178
3 8:0.566156478778
3 9:0.967656048985
3 10:0.529035729603
4 5:0.338427023427
4 6:0.543684536355
4 7:0.28092945722
4 8:0.517364805172
4 9:0.918973314737
4 10:0.514210262007
5 6:0.415232304024
5 7:0.301183364507
5 8:0.448552584024
5 9:0.827020366362
5 10:0.494259025579
6 7:0.412672357312
6 8:0.278351730003
6 9:0.664064259058
6 10:0.388342079611
7 8:0.382861398467
7 9:0.902857253094
7 10:0.451260025885
8 9:0.792152581081
8 10:0.367049007435
9 10:0.546458689706
</hsp>