sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHK-A331-A332
X
>3KNI-A31-A32
X
>2OTL-01768-01769
X
>1YJW-01768-01769
X
>1VQ4-01768-01769
X
>3CC7-01768-01769
X
>3CC4-01768-01769
X
>3CCU-01517-01518
X
>3AKZ-H72-H73
X
</seq>
<hsp>
0 1:1.0
0 2:0.475730142783
0 3:0.624460171826
0 4:0.451227383701
0 5:0.533895102703
0 6:0.471608732238
0 7:0.866973913405
0 8:0.620404933799
1 2:0.84234423304
1 3:0.569179270889
1 4:0.672093428747
1 5:0.751792225999
1 6:0.735611085675
1 7:0.638271366602
1 8:0.722058606706
2 3:0.400508211249
2 4:0.280235878947
2 5:0.465265568642
2 6:0.312810386408
2 7:0.655946228112
2 8:0.572923708692
3 4:0.338392732382
3 5:0.342064711101
3 6:0.436060562262
3 7:0.697299088136
3 8:0.430752617368
4 5:0.348429233671
4 6:0.115781414307
4 7:0.549906175626
4 8:0.380730940362
5 6:0.415073391525
5 7:0.763326737847
5 8:0.329032778437
6 7:0.528390049974
6 8:0.393224603472
7 8:0.727565552212
</hsp>