sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OH5-B42-B44
X
>3G6E-941-943
X
>3CD6-941-943
X
>1YJN-941-943
X
>1K8A-B41-B43
X
>1JJ2-941-943
X
>1NJI-B41-B43
X
>1YJW-941-943
X
</seq>
<hsp>
0 1:0.998499375025
0 2:1.0
0 3:0.925140421091
0 4:0.902824546974
0 5:0.960543252221
0 6:0.920272557845
0 7:0.734170279114
1 2:0.149089492191
1 3:0.399880433048
1 4:0.257663001069
1 5:0.111799985544
1 6:0.173882022149
1 7:0.290647134616
2 3:0.481670962407
2 4:0.242460904092
2 5:0.145099802762
2 6:0.170347117513
2 7:0.329747031204
3 4:0.325574634918
3 5:0.344143472035
3 6:0.330762942872
3 7:0.32800629937
4 5:0.180300257862
4 6:0.116216608113
4 7:0.241521857263
5 6:0.0951831723143
5 7:0.254987484599
6 7:0.22466642872
</hsp>