sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCR-941-943
X
>3F1F-B42-B44
X
>3CCL-941-943
X
>3G71-941-943
X
>1VQ8-941-943
X
>3CCS-941-943
X
>1MJI-C17-C19
X
</seq>
<hsp>
0 1:0.690274460551
0 2:0.571596940528
0 3:0.832488020774
0 4:0.98487064379
0 5:0.518508619895
0 6:1.0
1 2:0.737067979293
1 3:0.958982817889
1 4:0.774912229281
1 5:0.723456753133
1 6:0.871333479824
2 3:0.384577722228
2 4:0.607749373434
2 5:0.17756471493
2 6:0.739653150719
3 4:0.557145605396
3 5:0.352682469394
3 6:0.634241390448
4 5:0.644412248119
4 6:0.787752205789
5 6:0.630873733019
</hsp>