sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5F-6927-6929
X
>2DR2-B36-B37
X
>2QA4-0119-0105
X
>3G8T-Q102-Q103
X
>3U5H-52927-52928
X
>1VC7-B66-B64
X
>1VBY-B65-B63
X
>3U5D-1839-1841
X
>3PDR-X124-X125
X
>3U5F-61056-61057
X
>3U5D-12926-12927
X
>2QBZ-X116-X117
X
</seq>
<hsp>
0 1:0.724891171984
0 2:1.0
0 3:0.949075935728
0 4:0.738941341878
0 5:0.956589998358
0 6:0.622521879818
0 7:0.861558488283
0 8:0.745768535669
0 9:0.601427640648
0 10:0.680393977165
0 11:0.677202434547
1 2:0.505048803548
1 3:0.323435119972
1 4:0.30644013183
1 5:0.463919304997
1 6:0.32702272213
1 7:0.38404445324
1 8:0.435744510004
1 9:0.362151326453
1 10:0.300284538532
1 11:0.286270878914
2 3:0.614621442037
2 4:0.772499845647
2 5:0.441386736995
2 6:0.50548451816
2 7:0.36061975569
2 8:0.7711440292
2 9:0.814046673191
2 10:0.728383918462
2 11:0.673050604108
3 4:0.386550987039
3 5:0.628773002515
3 6:0.530473767034
3 7:0.523338448581
3 8:0.513015209009
3 9:0.483899634931
3 10:0.334347524012
3 11:0.431091879016
4 5:0.66134045102
4 6:0.511660927095
4 7:0.575427209916
4 8:0.356455805117
4 9:0.231143123976
4 10:0.20386994999
4 11:0.254265449955
5 6:0.406696680445
5 7:0.588818087613
5 8:0.71806832966
5 9:0.731344615877
5 10:0.696659114939
5 11:0.585075059665
6 7:0.531579790449
6 8:0.582852264506
6 9:0.512881281728
6 10:0.466585040262
6 11:0.428526912116
7 8:0.547253561607
7 9:0.601350203549
7 10:0.535872864109
7 11:0.48082820749
8 9:0.274183766095
8 10:0.314078986341
8 11:0.217768216543
9 10:0.20130056476
9 11:0.204405769634
10 11:0.249950915861
</hsp>