sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8T-A100-A99
X
>3F1H-A143-A112
X
>3OH5-A143-A112
X
>3OHJ-A143-A112
X
>3OHK-A143-A112
X
>3OH7-A143-A112
X
>3OHZ-A143-A112
X
>3OI1-A143-A112
X
</seq>
<hsp>
0 1:1.0
0 2:0.930096546087
0 3:0.843509447106
0 4:0.847135997662
0 5:0.941919818615
0 6:0.951930112372
0 7:0.935689280404
1 2:0.330539383951
1 3:0.318958002746
1 4:0.32105625434
1 5:0.301423235887
1 6:0.286979651887
1 7:0.283965685872
2 3:0.120286361717
2 4:0.135437823243
2 5:0.0521136166084
2 6:0.172689136939
2 7:0.181185004704
3 4:0.0446455640518
3 5:0.115989404723
3 6:0.217262733365
3 7:0.19630512167
4 5:0.120242255314
4 6:0.216319620651
4 7:0.182838698217
5 6:0.166045602545
5 7:0.162686868051
6 7:0.0785317347548
</hsp>