sequences=18
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1YZD-A2-B14
X
>1ZDH-R12-R1
X
>1AQ4-R13-R2
X
>2BU1-S14-S3
X
>3L25-F3-C5
X
>2AZ0-D2-C16
X
>2BU1-R1-R16
X
>2IZ9-S13-S2
X
>1ZDH-S12-S1
X
>1MJI-D13-D18
X
>1L8V-A129-A138
X
>3QRP-B6-C3
X
>1ZDI-S12-S1
X
>2H1M-B2-A14
X
>1Q2R-E3-E18
X
>2GCS-A19-B0
X
>3FTM-D2-C10
X
>2GCV-A18-B0
X
</seq>
<hsp>
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0 2:0.54410707579
0 3:0.720453065315
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</hsp>