sequences=16
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2VQF-A978-A999
X
>3CCJ-02453-02043
X
>1VQ9-02453-02043
X
>1Q81-A2453-A2043
X
>1YJ9-02453-02043
X
>1FFK-02406-01996
X
>3CPW-02453-02043
X
>1VQN-02453-02043
X
>2QA4-02452-02042
X
>3CCQ-02453-02043
X
>1VQP-02453-02043
X
>3CC4-02453-02043
X
>3CCU-02453-02043
X
>3G6E-02453-02043
X
>3CME-02453-02043
X
>2QEX-02453-02043
X
</seq>
<hsp>
0 1:1.0
0 2:0.848991642933
0 3:0.887319661482
0 4:0.866621672852
0 5:0.859127169297
0 6:0.911665017237
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2 3:0.324917630339
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12 15:0.145507251077
13 14:0.126432120182
13 15:0.155982584457
14 15:0.127639836563
</hsp>