sequences=14
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2J00-A513-A483
X
>2J02-A513-A483
X
>2J03-A1233-A503
X
>2J01-A1233-A503
X
>1FJG-A541-A545
X
>3OHD-A513-A483
X
>2VQE-A541-A545
X
>3F1G-A513-A483
X
>2J00-A541-A545
X
>1XMQ-A288-A2
X
>3F1G-A288-A2
X
>2J02-A288-A2
X
>2UXC-A288-A2
X
>2VQF-A288-A2
X
</seq>
<hsp>
0 1:0.0190914147398
0 2:0.87992522614
0 3:0.881740209778
0 4:0.603979496507
0 5:0.423710997546
0 6:0.667604759253
0 7:0.388929096861
0 8:0.560750304793
0 9:0.696346532852
0 10:0.767715322177
0 11:0.69550891643
0 12:0.634179753311
0 13:0.660644363612
1 2:0.868897067209
1 3:0.870714281532
1 4:0.593198751257
1 5:0.428398808141
1 6:0.657854811501
1 7:0.396357700387
1 8:0.555303797044
1 9:0.686679093824
1 10:0.762839405491
1 11:0.688390191394
1 12:0.624859709292
1 13:0.652896992181
2 3:0.0120909084287
2 4:0.513830552151
2 5:0.985675453313
2 6:0.588717122923
2 7:0.997564706788
2 8:0.700406043265
2 9:0.438685323278
2 10:0.685727948151
2 11:0.510561370102
2 12:0.488736369944
2 13:0.538788501104
3 4:0.51507813531
3 5:0.986837186753
3 6:0.590796449184
3 7:1.0
3 8:0.70225590043
3 9:0.443075730651
3 10:0.689181363485
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3 12:0.490826673531
3 13:0.541224312893
4 5:0.610053117078
4 6:0.151568621837
4 7:0.678957967292
4 8:0.286067842007
4 9:0.472959705224
4 10:0.592754927446
4 11:0.419440396967
4 12:0.345471465745
4 13:0.497258028988
5 6:0.630810116618
5 7:0.222834634636
5 8:0.393509559788
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5 11:0.64330895909
5 12:0.612086371063
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6 10:0.560124169714
6 11:0.410719246989
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6 13:0.514392851701
7 8:0.468700791595
7 9:0.701298269954
7 10:0.627690524312
7 11:0.640020253503
7 12:0.620089539817
7 13:0.620779811746
8 9:0.499238752506
8 10:0.477095840942
8 11:0.379729498197
8 12:0.343099857446
8 13:0.457807506187
9 10:0.312350585077
9 11:0.219899713129
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9 13:0.152075748874
10 11:0.21088362714
10 12:0.289597182207
10 13:0.226289657021
11 12:0.124229387386
11 13:0.165509118807
12 13:0.163848904052
</hsp>