sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5H-51268-51124
X
>2VQE-A513-A483
X
>1VQM-02167-02169
X
>1YJ9-02167-02169
X
>3CCM-02167-02169
X
>1VQ8-02167-02169
X
>2UUB-A844-A846
X
>3R8N-A870-A872
X
>3OH5-A1250-A1252
X
>3OH7-A1250-A1252
X
>3F1F-A1320-A1322
X
</seq>
<hsp>
0 1:0.732582139215
0 2:0.999991309173
0 3:0.943571142608
0 4:0.988619118416
0 5:0.99819015641
0 6:0.892997062787
0 7:0.704180093644
0 8:0.750239535379
0 9:0.747018698628
0 10:0.63246595926
1 2:0.622902044112
1 3:0.586401663851
1 4:0.581937314966
1 5:0.623538908597
1 6:0.558757492753
1 7:0.51609125971
1 8:0.488236480093
1 9:0.509825375622
1 10:0.615957628083
2 3:0.0941438400353
2 4:0.101452101164
2 5:0.07622095628
2 6:0.149758185601
2 7:0.414804663861
2 8:0.387431938448
2 9:0.415682747738
2 10:0.484832743438
3 4:0.140256386288
3 5:0.140649489898
3 6:0.147839827336
3 7:0.387181785292
3 8:0.382898139274
3 9:0.413792670106
3 10:0.465586474082
4 5:0.0784637066105
4 6:0.143973989902
4 7:0.372888056643
4 8:0.347757796296
4 9:0.378654568167
4 10:0.480198700525
5 6:0.160135459626
5 7:0.396783476747
5 8:0.350612626543
5 9:0.376855156179
5 10:0.469269569052
6 7:0.287856316765
6 8:0.296181810832
6 9:0.326667910462
6 10:0.377234606127
7 8:0.260514145921
7 9:0.275030060419
7 10:0.289151272323
8 9:0.0439821236672
8 10:0.238933411577
9 10:0.233298582568
</hsp>