sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CD6-956-957
X
>2J03-A933-A934
X
>3OHK-A933-A934
X
>1FFK-956-957
X
>1YJN-956-957
X
>1Q86-B56-B57
X
>1VQP-956-957
X
>3CME-956-957
X
>1M90-B56-B57
X
>3CC2-956-957
X
>1S72-956-957
X
</seq>
<hsp>
0 1:0.57045918099
0 2:0.746029490831
0 3:0.677368870726
0 4:0.738467862995
0 5:0.609127367655
0 6:0.63503668874
0 7:0.312261906659
0 8:0.439872937113
0 9:0.493471537923
0 10:0.437401383954
1 2:0.661581125838
1 3:0.778834352167
1 4:1.0
1 5:0.730218541302
1 6:0.711559601874
1 7:0.529379379142
1 8:0.662597365537
1 9:0.723344148957
1 10:0.629813682209
2 3:0.467626573421
2 4:0.609544438722
2 5:0.441799245695
2 6:0.341965675728
2 7:0.538215384979
2 8:0.515837639078
2 9:0.526982107855
2 10:0.481236705355
3 4:0.38353696213
3 5:0.19273714003
3 6:0.217809346396
3 7:0.423854526343
3 8:0.28311920988
3 9:0.2216223989
3 10:0.247429508925
4 5:0.367397664056
4 6:0.384017807299
4 7:0.540462753557
4 8:0.382188376241
4 9:0.383757292746
4 10:0.424309115592
5 6:0.170883445257
5 7:0.324539071781
5 8:0.247483572987
5 9:0.245803657732
5 10:0.244282798776
6 7:0.358969922612
6 8:0.305644635008
6 9:0.307997730799
6 10:0.275977401242
7 8:0.229317487763
7 9:0.306140533456
7 10:0.227371262928
8 9:0.135336821351
8 10:0.0997026368183
9 10:0.110163748617
</hsp>