sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1DUQ-H9-H7
X
>3OHJ-A657-A658
X
>3OGE-A420-A418
X
>2J02-A420-A418
X
>3U5B-21485-21486
X
>3OHZ-A657-A658
X
>1G1X-E6-E8
X
>2J01-A657-A658
X
>1G1X-J6-J8
X
>1FJG-A700-A702
X
>2UXC-A700-A702
X
</seq>
<hsp>
0 1:0.845815672334
0 2:0.714541011551
0 3:0.832379136076
0 4:0.732694552417
0 5:0.937767568737
0 6:0.893890542557
0 7:1.0
0 8:0.903434763706
0 9:0.994196552466
0 10:0.950379229307
1 2:0.439376595327
1 3:0.466452351639
1 4:0.670703268048
1 5:0.184440024839
1 6:0.500055885249
1 7:0.296363904652
1 8:0.386357415847
1 9:0.459248053043
1 10:0.40587614011
2 3:0.288162825885
2 4:0.423697532925
2 5:0.570750547882
2 6:0.361168733298
2 7:0.482761242847
2 8:0.536050675113
2 9:0.428492798549
2 10:0.411159634275
3 4:0.341183366403
3 5:0.541534911477
3 6:0.127762041369
3 7:0.397023883816
3 8:0.444144827554
3 9:0.252053389711
3 10:0.241493684987
4 5:0.719880461095
4 6:0.351589423019
4 7:0.692781825252
4 8:0.706206653108
4 9:0.525054473899
4 10:0.495422362516
5 6:0.542843542317
5 7:0.338475906184
5 8:0.434689929186
5 9:0.486426508277
5 10:0.421902407078
6 7:0.415522959643
6 8:0.461070028923
6 9:0.209195833514
6 10:0.206834300587
7 8:0.291048360872
7 9:0.286054348443
7 10:0.269517354541
8 9:0.359051006298
8 10:0.351158086635
9 10:0.087624738998
</hsp>