sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OI1-A886-A887
X
>3F1H-A951-A952
X
>3SKI-A10-A12
X
>3OHJ-A785-A783
X
>3OI1-A785-A783
X
>3OH7-A886-A887
X
>3OH5-A785-A783
X
>3SKI-B10-B12
X
>3SKZ-B10-B12
X
</seq>
<hsp>
0 1:0.594431686266
0 2:0.582614708071
0 3:0.436291972693
0 4:0.626820639875
0 5:0.408908339467
0 6:0.486121651888
0 7:0.634471310265
0 8:0.743244339321
1 2:0.948034154723
1 3:0.937980337181
1 4:0.999997672512
1 5:0.366950823527
1 6:0.911052844937
1 7:0.918620519746
1 8:0.971193010501
2 3:0.439290489179
2 4:0.527798961776
2 5:0.707951159944
2 6:0.449089989009
2 7:0.231178558837
2 8:0.352008464951
3 4:0.311327125379
3 5:0.696229704822
3 6:0.165089897617
3 7:0.489031460768
3 8:0.563157922437
4 5:0.78786298737
4 6:0.195657453312
4 7:0.46900048847
4 8:0.507393735872
5 6:0.697094678164
5 7:0.669687561226
5 8:0.716001568187
6 7:0.45245427808
6 8:0.50302657674
7 8:0.226381251598
</hsp>