sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OGE-A700-A702
X
>2J02-A700-A702
X
>3F1G-A700-A702
X
>3OHC-A541-A545
X
>3OI0-A541-A545
X
>3R8O-A561-A565
X
>2ZJR-X1376-X1378
X
</seq>
<hsp>
0 1:0.256938220482
0 2:0.335765262383
0 3:0.876725761112
0 4:0.745986613454
0 5:0.872810540598
0 6:0.87786428057
1 2:0.387202150645
1 3:1.0
1 4:0.878402898875
1 5:0.957721958663
1 6:0.974430103792
2 3:0.642203481381
2 4:0.600457467104
2 5:0.666551426616
2 6:0.757590605736
3 4:0.340044793214
3 5:0.355843777082
3 6:0.565702525146
4 5:0.236758713898
4 6:0.438446443489
5 6:0.50367370597
</hsp>