sequences=14
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2GDI-Y59-Y14
X
>2GDI-X59-X14
X
>1GID-A84-A86
X
>2CV1-D45-D8
X
>2DXI-D45-D8
X
>1N77-C45-C8
X
>1G59-B45-B8
X
>1G59-D45-D8
X
>2CV0-D45-D8
X
>1N78-D45-D8
X
>2CV2-C45-C8
X
>2CV1-C45-C8
X
>2CV0-C45-C8
X
>2DXI-C45-C8
X
</seq>
<hsp>
0 1:0.30493371931
0 2:0.812827028182
0 3:0.801496199082
0 4:0.872274891245
0 5:0.999999049954
0 6:0.942930117887
0 7:0.888088528981
0 8:0.872001878153
0 9:0.995996162384
0 10:0.968906315295
0 11:0.941190681487
0 12:0.988592860189
0 13:0.952649153227
1 2:0.542713199932
1 3:0.549660094048
1 4:0.602986669682
1 5:0.736812653075
1 6:0.70024533285
1 7:0.63565986621
1 8:0.597547348549
1 9:0.709954709294
1 10:0.698810339829
1 11:0.675349419553
1 12:0.711577181897
1 13:0.674348004269
2 3:0.358373513894
2 4:0.330803042919
2 5:0.504940481448
2 6:0.501211813186
2 7:0.46208056507
2 8:0.298588579635
2 9:0.406393974618
2 10:0.341059113317
2 11:0.393088075704
2 12:0.360847425257
2 13:0.360534659487
3 4:0.151791450341
3 5:0.267155754468
3 6:0.22620766389
3 7:0.195648933423
3 8:0.190797909746
3 9:0.282263357546
3 10:0.212975396971
3 11:0.209339907812
3 12:0.23392664031
3 13:0.214897418281
4 5:0.299530739111
4 6:0.317369361607
4 7:0.28269702866
4 8:0.0935513596819
4 9:0.19237463855
4 10:0.176666249927
4 11:0.248279639469
4 12:0.186173336348
4 13:0.172900117781
5 6:0.144636497205
5 7:0.135415575997
5 8:0.321948490112
5 9:0.245771017964
5 10:0.237877368785
5 11:0.160077444642
5 12:0.214030894566
5 13:0.203533860167
6 7:0.0915380958097
6 8:0.349931878788
6 9:0.331633761014
6 10:0.270026310937
6 11:0.154178611306
6 12:0.254842388623
6 13:0.244461968428
7 8:0.307479472599
7 9:0.298648585994
7 10:0.25531204885
7 11:0.145928961575
7 12:0.241549203767
7 13:0.21762162738
8 9:0.222214404073
8 10:0.15674481891
8 11:0.262383225246
8 12:0.192484369002
8 13:0.188648510354
9 10:0.220108370448
9 11:0.260023004056
9 12:0.183033825045
9 13:0.174211061049
10 11:0.170014579375
10 12:0.103380749847
10 13:0.135497643958
11 12:0.134697517918
11 13:0.122361957845
12 13:0.0592614925936
</hsp>