sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2HOO-A52-A54
X
>3U5D-12589-12588
X
>1WSU-G16-G17
X
>3U5H-52590-52589
X
>2UWM-C18-C19
X
>1WSU-E17-E18
X
>3U5F-61608-61609
X
</seq>
<hsp>
0 1:0.984770698144
0 2:0.795815423074
0 3:0.926426454173
0 4:0.978717210318
0 5:0.974874889321
0 6:0.99999656335
1 2:0.752327304802
1 3:0.144852502945
1 4:0.718765463079
1 5:0.774196567676
1 6:0.556897406811
2 3:0.767017793331
2 4:0.485149244564
2 5:0.339250519994
2 6:0.566081182851
3 4:0.694411040734
3 5:0.772055504666
3 6:0.603429260657
4 5:0.293892794911
4 6:0.776853830384
5 6:0.651936330347
</hsp>