sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2QA4-0947-0968
X
>3CCS-0948-0969
X
>3P22-H3-G33
X
>3P22-D3-C33
X
>1L8V-A84-A86
X
>1L8V-B84-B86
X
</seq>
<hsp>
0 1:0.487446245891
0 2:0.739896492046
0 3:0.745460920572
0 4:1.0
0 5:0.990618883683
1 2:0.472597423647
1 3:0.433767515466
1 4:0.827100702249
1 5:0.818861220112
2 3:0.108947822155
2 4:0.44803703431
2 5:0.442475687062
3 4:0.466297945271
3 5:0.460792613345
4 5:0.0299883359321
</hsp>