sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5B-258-262
X
>3OHK-A2620-A2721
X
>3OHJ-A2620-A2721
X
>3OH7-A2620-A2721
X
>3OH5-A2620-A2721
X
>3OI1-A2620-A2721
X
>3OHZ-A2620-A2721
X
>2J03-A2667-A2768
X
>2J01-A2667-A2768
X
</seq>
<hsp>
0 1:0.917554238095
0 2:0.922504368396
0 3:0.999999977229
0 4:0.990340117409
0 5:0.99701889168
0 6:0.983948789075
0 7:0.754120069164
0 8:0.76219162903
1 2:0.0262632979031
1 3:0.248331257389
1 4:0.243396701641
1 5:0.266938742426
1 6:0.266472703706
1 7:0.405020557583
1 8:0.414801142816
2 3:0.246217705238
2 4:0.240452099111
2 5:0.266582900418
2 6:0.26543227272
2 7:0.401939801768
2 8:0.411623925018
3 4:0.0286883576232
3 5:0.268759926464
3 6:0.269790514256
3 7:0.453192525896
3 8:0.458257567437
4 5:0.271646326955
4 6:0.270806555502
4 7:0.444315648449
4 8:0.449462154883
5 6:0.0272104037194
5 7:0.354770271873
5 8:0.354843757878
6 7:0.334459558597
6 8:0.334303962876
7 8:0.0205458497427
</hsp>