sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNK-A2518-A1928
X
>3OHY-A1334-A1340
X
>3OI0-A1334-A1340
X
>3KNH-A796-A835
X
>3OGY-A1334-A1340
X
>3OGE-A1334-A1340
X
>3F1G-A805-A844
X
>3F1E-A805-A844
X
>3R8T-A1640-A1321
X
</seq>
<hsp>
0 1:0.354967149608
0 2:0.350811548213
0 3:0.247939852487
0 4:0.316324930179
0 5:0.317766899079
0 6:0.308473865669
0 7:0.303789037363
0 8:0.937159058619
1 2:0.00785078257608
1 3:0.234205037919
1 4:0.214918799953
1 5:0.2126501489
1 6:0.304487468117
1 7:0.305920271752
1 8:0.991203485913
2 3:0.232132658733
2 4:0.21238245301
2 5:0.210287682572
2 6:0.303855165865
2 7:0.305244605166
2 8:0.992469178944
3 4:0.227137200993
3 5:0.226006397138
3 6:0.13396165273
3 7:0.131888743749
3 8:0.839291557316
4 5:0.0067960787789
4 6:0.263089994838
4 7:0.267836892454
4 8:1.0
5 6:0.260505331784
5 7:0.26528949854
5 8:0.997041073477
6 7:0.0110765076906
6 8:0.760184325285
7 8:0.757246190275
</hsp>