sequences=25
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1NJI-A916-A917
X
>1VQ5-0916-0917
X
>1NJI-A2350-A2351
X
>3OHK-A243-A244
X
>1YI2-979-980
X
>1VQ4-979-980
X
>1VQO-02350-02351
X
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X
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X
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X
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X
>3U5B-21552-21553
X
>1VQ9-01140-01141
X
>2UUB-A78-A79
X
>3U5H-5352-5353
X
>3G78-A138-A139
X
>2J03-A1596-A1597
X
>3CC4-01691-01692
X
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X
>2OTJ-02090-02091
X
>1Q82-A1691-A1692
X
>3F1H-A504-A505
X
>3OHJ-A389-A390
X
>3R8S-A1648-A1649
X
>3U5H-5375-5376
X
</seq>
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