sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1VQ9-01159-01160
X
>1S72-01159-01160
X
>3U5D-11235-11236
X
>3CC7-0222-0223
X
>1VQ6-01695-01696
X
>3CCL-01695-01696
X
>2OTL-01695-01696
X
</seq>
<hsp>
0 1:0.38140488978
0 2:0.990652119096
0 3:0.999992398457
0 4:0.920471896646
0 5:0.784087943179
0 6:0.770283317225
1 2:0.883672662655
1 3:0.987874793761
1 4:0.742806745657
1 5:0.588999755922
1 6:0.594085893093
2 3:0.439004714117
2 4:0.383291116947
2 5:0.37593914573
2 6:0.447414455298
3 4:0.502715328464
3 5:0.588161332275
3 6:0.551750808027
4 5:0.204736995987
4 6:0.188832921257
5 6:0.173311568266
</hsp>