sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1XMQ-A379-A380
X
>3R8T-A734-A735
X
>3OHZ-A857-A858
X
>1NJI-A2533-A2534
X
>3CCU-02533-02534
X
>1YIT-02533-02534
X
>3KNK-A2562-A2563
X
</seq>
<hsp>
0 1:0.835289938374
0 2:0.968680010001
0 3:0.993507191807
0 4:0.999994468629
0 5:0.972884388543
0 6:0.820407563989
1 2:0.5302388238
1 3:0.610790691196
1 4:0.606374131285
1 5:0.593916306917
1 6:0.602024484796
2 3:0.162792281374
2 4:0.163263288722
2 5:0.132130030573
2 6:0.353703841725
3 4:0.0356191996677
3 5:0.0639067982578
3 6:0.370461179248
4 5:0.0713311817154
4 6:0.36996986134
5 6:0.35470733654
</hsp>