sequences=25
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHD-A1128-A1129
X
>1L8V-B48-B49
X
>2VQF-A441-A442
X
>3CME-0965-0966
X
>3U5B-2167-2168
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X
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X
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X
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X
>1M5K-B30-B31
X
>2NZ4-S123-S124
X
>3U5H-52081-52082
X
>3SKL-B61-B62
X
>3FTE-D0-D1
X
>1VQL-01615-01616
X
>3U5H-5606-5607
X
>3OWW-B61-B62
X
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X
>2VQF-A1264-A1265
X
>3OHJ-A45-A46
X
>3FTE-C0-C1
X
>2UUA-A252-A253
X
>2GCS-A13-A14
X
>3U5H-5405-5406
X
</seq>
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