sequences=14
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3SLM-A44-A45
X
>2OTJ-02296-02297
X
>2R1S-B7-B8
X
>3U5D-1690-1691
X
>2VQF-A129-A130
X
>1YJN-9103-9104
X
>3CCS-01538-01539
X
>2J03-A1595-A1596
X
>3CCQ-01538-01539
X
>1NJI-A2326-A2327
X
>3CXC-01564-01565
X
>1S72-01564-01565
X
>1JJ2-01690-01691
X
>1S72-01690-01691
X
</seq>
<hsp>
0 1:0.265669795654
0 2:0.67748970983
0 3:0.65401077629
0 4:0.564170797005
0 5:0.594944524157
0 6:0.395654201797
0 7:0.734452813212
0 8:0.431475693373
0 9:0.789598147058
0 10:0.703654954983
0 11:0.726222811412
0 12:1.0
0 13:0.999015638071
1 2:0.509759583706
1 3:0.492111260404
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1 5:0.425270610739
1 6:0.39445006617
1 7:0.650046697595
1 8:0.434020982061
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1 10:0.569531837482
1 11:0.585712435847
1 12:0.849603091242
1 13:0.851015261977
2 3:0.595575723168
2 4:0.342089584809
2 5:0.48651643165
2 6:0.441072007562
2 7:0.27893451789
2 8:0.406744629792
2 9:0.260182974183
2 10:0.213522053354
2 11:0.259222305921
2 12:0.430513529793
2 13:0.434605743738
3 4:0.269233110041
3 5:0.182463229544
3 6:0.673873452865
3 7:0.742658160325
3 8:0.643776719294
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3 12:0.788271111807
3 13:0.795061255415
4 5:0.176067845391
4 6:0.48623225033
4 7:0.514646198849
4 8:0.450333003862
4 9:0.368639635435
4 10:0.36466995404
4 11:0.399678085239
4 12:0.61830568534
4 13:0.624572599057
5 6:0.60330957557
5 7:0.642363605456
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5 12:0.709759504505
5 13:0.715844678535
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6 10:0.43466819448
6 11:0.477602566113
6 12:0.703847507099
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7 8:0.344899770866
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7 10:0.207214993399
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7 12:0.395903208917
7 13:0.394934343094
8 9:0.4849820634
8 10:0.377080470073
8 11:0.425471817762
8 12:0.659392296993
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9 10:0.288068443701
9 11:0.217465298065
9 12:0.405867375392
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10 11:0.224815190512
10 12:0.321928355855
10 13:0.325177297333
11 12:0.341182746268
11 13:0.338673020301
12 13:0.0170060118814
</hsp>