sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CMA-02409-02410
X
>1XMQ-A672-A673
X
>3U5D-12978-12979
X
>1VQL-088-089
X
>2OTL-088-089
X
>3R8T-A748-A749
X
>2VQF-A420-A421
X
</seq>
<hsp>
0 1:0.312692278074
0 2:0.232850641818
0 3:0.375367296161
0 4:0.469602404088
0 5:1.0
0 6:0.869237891813
1 2:0.22556431613
1 3:0.292032130962
1 4:0.343504314132
1 5:0.945358483236
1 6:0.754629103267
2 3:0.238154425132
2 4:0.316946682151
2 5:0.931121126488
2 6:0.740927145999
3 4:0.132122598919
3 5:0.798050254085
3 6:0.57237729552
4 5:0.797417542876
4 6:0.548321192568
5 6:0.346394864111
</hsp>