sequences=23
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CC4-0117-0106
X
>1M90-A512-A513
X
>3KFU-N48-N49
X
>1QVG-0512-0513
X
>3RG5-A30-A31
X
>3OWZ-B8-B9
X
>3V7E-D51-D52
X
>3OHZ-A1460-A1461
X
>3GX7-A89-A90
X
>3F1H-A910-A911
X
>3CCM-01455-01456
X
>1YHQ-972-973
X
>1YIJ-972-973
X
>3G6E-0276-0277
X
>3CCJ-01349-01350
X
>3CMA-972-973
X
>3R8T-A1869-A1870
X
>2OTJ-01136-01137
X
>3F1F-A2472-A2473
X
>1VBX-B16-B17
X
>3G9C-R30-R31
X
>3KNI-A843-A844
X
>1VQK-01334-01335
X
</seq>
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