ClaRNA

Doublet Group info: classifier/stacking/>>/AG/sub-010

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: >>/AG/sub-010
Members:
count: 18
download members
1L8V:A12:A13
1Q86:A627:A628
1Q81:A276:A277
3OHY:A690:A691
2QA4:0307:0308
3F1F:A892:A893
2J01:A1051:A1052
2PN4:D11:D12
1FJG:A288:A289
3Q3Z:V54:V55
3GX5:A9:A10
2UUB:A1152:A1153
430D:A14:A15
1ZFV:B8:B9
1VQM:0497:0500
3CCV:0497:0500
3CCQ:0497:0500
2OTL:0497:0500
Closest classifer groups: show all      show selected
Group Members RMSD
base-ribose/H_0BR 413 0.093
stacking/<< 28 0.118
stacking/>< 4 0.120
stacking/>> 10 0.138
base-phosphate/H_7BPh 9 0.156
base-phosphate/W_3BPh 8 0.163
base-ribose/W_5BR 6 0.175
base-phosphate/H_0BPh 2 0.230
base-ribose/S_1BR 1 0.253
base-ribose/H_9BR 6 0.286

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol