sequences=16
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OI1-A2595-A2597
X
>2J03-A2642-A2644
X
>3OHZ-A1091-A1093
X
>1YIT-01704-01710
X
>1JJ2-0441-0467
X
>2OTJ-01704-01710
X
>1YJN-02600-02602
X
>3I56-02442-02423
X
>2J01-A1609-A1615
X
>3CC7-02442-02423
X
>2J03-A1609-A1615
X
>1N8R-A2442-A2423
X
>1YJW-01704-01710
X
>3OHZ-A1368-A1370
X
>1QVG-02442-02423
X
>2J00-A1295-A1299
X
</seq>
<hsp>
0 1:0.31245951792
0 2:0.628153985452
0 3:0.551120351651
0 4:0.904872686246
0 5:0.560062285279
0 6:0.908069442556
0 7:0.493650536877
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0 9:0.482491818746
0 10:0.369610127586
0 11:0.498538917988
0 12:0.545972809325
0 13:0.62241460504
0 14:0.548192061795
0 15:0.567981580553
1 2:0.504255147172
1 3:0.576975246613
1 4:1.0
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1 7:0.464015701362
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1 9:0.489641134238
1 10:0.320193682557
1 11:0.440691566938
1 12:0.564601634246
1 13:0.672130677553
1 14:0.531576346967
1 15:0.59716506574
2 3:0.632395789723
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3 4:0.612197971509
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3 8:0.348882582895
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3 15:0.411561038711
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8 9:0.331383619061
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8 11:0.253179991258
8 12:0.336156280077
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8 15:0.408112297486
9 10:0.326142174315
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10 11:0.256970576017
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10 13:0.403976980395
10 14:0.340609581955
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11 12:0.184881161578
11 13:0.334470190218
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11 15:0.32922687792
12 13:0.179767776833
12 14:0.228254677389
12 15:0.341981003768
13 14:0.280595531697
13 15:0.371668498952
14 15:0.222538902935
</hsp>