sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2UXC-A1336-A1337
X
>1Q86-A1349-A1350
X
>2OTJ-0443-0444
X
>3CPW-01349-01350
X
>1VQN-0696-0697
X
>2QEX-01349-01350
X
>3CC4-0696-0697
X
>1YJ9-0696-0697
X
>3CXC-02596-02597
X
>1VQ9-0443-0444
X
>2J01-A1422-A1423
X
</seq>
<hsp>
0 1:0.94828152602
0 2:0.720118061935
0 3:0.847921975073
0 4:0.999993401877
0 5:0.780134440229
0 6:0.883095083811
0 7:0.667898072487
0 8:0.75851113673
0 9:0.714325088156
0 10:0.915269304338
1 2:0.469453946194
1 3:0.334403310912
1 4:0.61431663723
1 5:0.240901191721
1 6:0.684092912904
1 7:0.53099904591
1 8:0.45482147091
1 9:0.494555590968
1 10:0.652570913778
2 3:0.61555314861
2 4:0.48271212855
2 5:0.468009949762
2 6:0.423262237904
2 7:0.183808845358
2 8:0.352401544738
2 9:0.297910952036
2 10:0.596274117426
3 4:0.778457065746
3 5:0.177697429162
3 6:0.842185985585
3 7:0.651289426444
3 8:0.557874172148
3 9:0.603870528353
3 10:0.755407121969
4 5:0.668955608525
4 6:0.216922254046
4 7:0.457188658215
4 8:0.404594380684
4 9:0.308635514763
4 10:0.564548383846
5 6:0.717545152484
5 7:0.525866811969
5 8:0.465551795052
5 9:0.474917513788
5 10:0.707802766314
6 7:0.356841915582
6 8:0.365966943643
6 9:0.270832754634
6 10:0.515589557145
7 8:0.28493864656
7 9:0.254814257463
7 10:0.46957952
8 9:0.246451403917
8 10:0.327923373728
9 10:0.504326393751
</hsp>