sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OH5-A1142-A1143
X
>3OHD-A910-A911
X
>3CMA-02101-02102
X
>1JJ2-02101-02102
X
>1VQP-02410-02411
X
>1FFK-01835-01836
X
>1K9M-A1383-A1384
X
>1ET4-B30-B31
X
>1YHQ-01120-01121
X
</seq>
<hsp>
0 1:0.727014330282
0 2:0.39544073993
0 3:0.533916932182
0 4:0.47489010112
0 5:0.472960715839
0 6:0.479728224589
0 7:0.483484023338
0 8:0.494668977799
1 2:0.801654440624
1 3:0.780773615919
1 4:0.819329619864
1 5:0.682287062232
1 6:0.699691685677
1 7:1.0
1 8:0.676044357067
2 3:0.226304236427
2 4:0.276743371273
2 5:0.378839401846
2 6:0.353280572949
2 7:0.385298224794
2 8:0.669819745929
3 4:0.254357279462
3 5:0.437553800743
3 6:0.429607434269
3 7:0.540014503982
3 8:0.790617011162
4 5:0.30414134741
4 6:0.334999125247
4 7:0.409554151871
4 8:0.67405703903
5 6:0.139737592889
5 7:0.436172667169
5 8:0.465098673826
6 7:0.424485310793
6 8:0.474111928735
7 8:0.577371404634
</hsp>