ClaRNA

Doublet Group info: classifier/stacking/></CG/sub-006

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: ></CG/sub-006
Members:
count: 28
download members
3R8O:A174:A175
3R1D:E4:E5
3R1D:A4:A5
3R1C:I1:I2
3R1C:M4:M5
3R1C:X1:X2
3R1C:F1:F2
3R8N:A174:A175
3R1C:A4:A5
3R1C:S4:S5
3R1C:L1:L2
3R1C:Q4:Q5
3R1C:O4:O5
3R1C:Y4:Y5
3R1C:J1:J2
3R1C:V4:V5
3R1C:R4:R5
3R1C:D1:D2
3R1C:T4:T5
3R1C:B4:B5
3R1C:P4:P5
3R1C:F4:F5
3R1D:D4:D5
3R1C:U4:U5
3SJ2:A9:A10
3SJ2:B4:B5
3SJ2:A6:A7
3R1C:N4:N5
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/>< 32 0.098
stacking/>> 3 0.159
base-ribose/H_0BR 2 0.220
stacking/<< 2 0.231
base-phosphate/W_6BPh 55 0.287
base-phosphate/H_9BPh 1 0.385
base-ribose/H_9BR 10 0.474
base-ribose/H_7BR 62 0.494
base-phosphate/H_0BPh 11 0.639
base-ribose/W_6BR 6 0.687

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol