sequences=20
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8O-A756-A579
X
>2PXU-B17-B32
X
>3G9C-G4-R26
X
>3LQX-B17-B32
X
>3G9C-F4-Q26
X
>2PXB-B17-B32
X
>2PXD-B17-B32
X
>2PXK-B17-B32
X
>2PXL-B17-B32
X
>1DUL-B17-B32
X
>3NDB-M79-M94
X
>2PXT-B17-B32
X
>1HQ1-B17-B32
X
>2PXP-B17-B32
X
>2PXV-B17-B32
X
>2H0Z-A5-B11
X
>2PXF-B17-B32
X
>2HO7-A5-B11
X
>3G9C-E4-P26
X
>3KNH-A186-A161
X
</seq>
<hsp>
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</hsp>