sequences=17
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCL-02376-02323
X
>3U5F-61758-61761
X
>3R8O-A718-A719
X
>2UUA-A1473-A1476
X
>1XMQ-A1467-A1470
X
>3U5B-21746-21749
X
>2VQE-A1473-A1476
X
>1FJG-A1473-A1476
X
>2VQF-A1473-A1476
X
>3R8O-A1499-A1502
X
>2J00-A1473-A1476
X
>3R8N-A1499-A1502
X
>3U5D-12895-12192
X
>3U5H-52896-52196
X
>3CR1-C7-A5
X
>3BBM-C7-A5
X
>3BBK-C7-A5
X
</seq>
<hsp>
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0 2:0.364738228137
0 3:0.914220247654
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0 5:0.82587208355
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</hsp>