sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3FOZ-D39-D40
X
>3OWZ-B25-B26
X
>3OXE-A30-A31
X
>3OXM-A30-A31
X
>3OWZ-A30-A31
X
>3OWW-A30-A31
X
>3OWW-B29-B30
X
>3OXE-B30-B31
X
>3OXM-B30-B31
X
>3R1C-G4-G5
X
>3R1C-C1-C2
X
</seq>
<hsp>
0 1:0.994246164292
0 2:0.969040651354
0 3:0.955797220589
0 4:0.956164199158
0 5:0.969667536646
0 6:0.999801157774
0 7:0.92252362276
0 8:1.0
0 9:0.82520946574
0 10:0.799756784431
1 2:0.257680235632
1 3:0.215519099152
1 4:0.206580484638
1 5:0.180580685235
1 6:0.206825805652
1 7:0.263985675042
1 8:0.239134324492
1 9:0.761970774975
1 10:0.701571866033
2 3:0.0818833315578
2 4:0.079732252494
2 5:0.204535402661
2 6:0.202385011227
2 7:0.183484377568
2 8:0.179626918089
2 9:0.771512673421
2 10:0.705955123955
3 4:0.0901239038969
3 5:0.148418963518
3 6:0.191237865112
3 7:0.197757223879
3 8:0.178046949454
3 9:0.717646450898
3 10:0.653820819893
4 5:0.197875853846
4 6:0.195317471151
4 7:0.170221809927
4 8:0.178337268236
4 9:0.773935603648
4 10:0.702009477148
5 6:0.154358336216
5 7:0.235434797207
5 8:0.172962250092
5 9:0.63982365391
5 10:0.585393466422
6 7:0.137244848556
6 8:0.0627752765836
6 9:0.721396044487
6 10:0.666054331725
7 8:0.111521983387
7 9:0.739929681205
7 10:0.671192499674
8 9:0.723608783624
8 10:0.660056987269
9 10:0.148307293978
</hsp>